[SCM] Perl extension for running and parsing NCBIs BLAST 2.x branch, master, updated. debian/0.66-1-6-g721d873
Jens Preussner
jenzo at cbv.net
Mon Jul 9 16:35:56 UTC 2012
The following commit has been merged in the master branch:
commit 721d8734ccea7742c99b75e2f614c69c86f26469
Author: Jens Preussner <jenzo at cbv.net>
Date: Mon Jul 9 16:35:05 2012 +0000
Reviewed package description in d/control.
diff --git a/debian/control b/debian/control
index ad1cee4..b2b900d 100644
--- a/debian/control
+++ b/debian/control
@@ -10,18 +10,13 @@ Standards-Version: 3.9.3
Homepage: http://genome.nhgri.nih.gov/
Package: libnhgri-blastall-perl
-Architecture: any
+Architecture: all
Depends: ${perl:Depends}, ${shlibs:Depends}, ${misc:Depends}
-Description: Perl extension for running and parsing NCBIs BLAST 2.x
- If you have NCBI's BLAST2 or WU-BLAST installed locally and your environment
- is already setup you can use Perls object-oriented capabilities to run your
- BLASTs. Also if you have a blastcl3 binary from the toolkit (or binaries
- from the FTP site) you can run BLAST over the network. There are also methods
- to blast single sequences against each other using the bl2seq binaries
- (also in the toolkit and binaries). You can blast one sequence against a
- library of sequences using the blast_one_to_many method. You can format
- databases with formatdb method. You can also have NHGRI::Blastall read
- existing BLAST reports. If you have a database of repetitive DNA or other
- DNA you would like to mask out, you can use the mask method to mask the
- data against these databases. You can then use either the filter or result
- methods to parse the report and access the various elements of the data.
+Description: Perl extension for running and parsing NCBI's BLAST 2.x
+ This extension will enable usage of BLAST out of a Perl script, if BLAST2
+ or WU-BLAST are installed locally. Main features are:
+ * run BLAST (also via network, which requires blastcl3)
+ * BLAST single sequences against each other or against a given library
+ * format databases
+ * mask out repetitive DNA
+ * read, parse and filter existing BLAST reports
--
Perl extension for running and parsing NCBIs BLAST 2.x
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