[libbio-samtools-perl] branch master updated (26a1445 -> 176783b)

[gregor herrmann]

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gregoa pushed a change to branch master
in repository libbio-samtools-perl.

      from  26a1445   update changelog
       new  da8fa4c   Imported Upstream version 1.42
       new  08e9df1   New upstream release.
       new  433f1bd   Update years of upstream copyright and licensing terms.
       new  176783b   update changelog

The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Changes                         |   4 +
 INSTALL.pl                      | 127 ----------
 LICENSE                         | 523 +++++++++++++++++++++++++++-------------
 MANIFEST                        |   1 -
 META.json                       |   6 +-
 META.yml                        |   6 +-
 README                          |  21 +-
 debian/changelog                |  12 +-
 debian/copyright                |  20 +-
 lib/Bio/DB/Bam/AlignWrapper.pm  |  53 ++--
 lib/Bio/DB/Bam/Alignment.pm     |  22 +-
 lib/Bio/DB/Bam/Pileup.pm        |  11 +-
 lib/Bio/DB/Bam/PileupWrapper.pm |  11 +-
 lib/Bio/DB/Bam/Query.pm         |  25 +-
 lib/Bio/DB/Sam.pm               |  13 +-
 lib/Bio/DB/Sam/Constants.pm     |  13 +-
 t/01sam.t                       | 168 +++++++++++--
 17 files changed, 628 insertions(+), 408 deletions(-)
 delete mode 100755 INSTALL.pl

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