[DRE-commits] [ruby-crb-blast] 03/03: new upstream release

[Michael Crusoe]

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misterc-guest pushed a commit to branch master
in repository ruby-crb-blast.

commit 6918fe91837063ea7ef21361a8aaa24893f80989
Author: Michael R. Crusoe <crusoe at ucdavis.edu>
Date:   Fri Dec 2 08:01:53 2016 -0800

    new upstream release
---
 debian/changelog                   |  6 +++++
 debian/patches/drop-bindeps-req    | 33 ++-----------------------
 debian/patches/drop-coverage-check | 50 --------------------------------------
 3 files changed, 8 insertions(+), 81 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index a579922..eba20cd 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,9 @@
+ruby-crb-blast (0.6.8-1) unstable; urgency=medium
+
+  * New upstream release.
+
+ -- Michael R. Crusoe <michael.crusoe at gmail.com>  Fri, 02 Dec 2016 08:05:22 -0800
+
 ruby-crb-blast (0.6.6-1) unstable; urgency=medium
 
   * New upstream release
diff --git a/debian/patches/drop-bindeps-req b/debian/patches/drop-bindeps-req
index 201a156..02286a8 100644
--- a/debian/patches/drop-bindeps-req
+++ b/debian/patches/drop-bindeps-req
@@ -10,7 +10,7 @@ Description: we manage deps using packages; not bindeps
  
  opts = Trollop::options do
    version CRB_Blast::VERSION::STRING.dup
-@@ -55,10 +54,6 @@
+@@ -58,10 +57,6 @@
  Trollop::die :query, "must exist" if !File.exist?(opts[:query])
  Trollop::die :target, "must exist" if !File.exist?(opts[:target])
  
@@ -19,8 +19,8 @@ Description: we manage deps using packages; not bindeps
 -Bindeps.require gem_deps
 -
  blaster = CRB_Blast::CRB_Blast.new(opts.query, opts.target)
+ print "Making blast databases..." if opts.verbose
  dbs = blaster.makedb
- run = blaster.run_blast(opts.evalue, opts.threads, opts.split)
 --- ruby-crb-blast.orig/test/test_bin.rb
 +++ ruby-crb-blast/test/test_bin.rb
 @@ -7,7 +7,7 @@
@@ -42,32 +42,3 @@ Description: we manage deps using packages; not bindeps
  
    gem.add_development_dependency 'rake', '~> 10.3', '>= 10.3.2'
    gem.add_development_dependency 'turn', '~> 0.9', '>= 0.9.7'
---- ruby-crb-blast.orig/metadata.yml
-+++ ruby-crb-blast/metadata.yml
-@@ -86,26 +86,6 @@
-       - !ruby/object:Gem::Version
-         version: 0.2.0
- - !ruby/object:Gem::Dependency
--  name: bindeps
--  requirement: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '1.0'
--    - - ">="
--      - !ruby/object:Gem::Version
--        version: 1.0.3
--  type: :runtime
--  prerelease: false
--  version_requirements: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '1.0'
--    - - ">="
--      - !ruby/object:Gem::Version
--        version: 1.0.3
--- !ruby/object:Gem::Dependency
-   name: rake
-   requirement: !ruby/object:Gem::Requirement
-     requirements:
diff --git a/debian/patches/drop-coverage-check b/debian/patches/drop-coverage-check
index 42f88bc..c2114d9 100644
--- a/debian/patches/drop-coverage-check
+++ b/debian/patches/drop-coverage-check
@@ -29,53 +29,3 @@ Description: drop code coverage tooling
    gem.add_development_dependency 'shoulda-context', '~> 1.2', '>= 1.2.1'
 -  gem.add_development_dependency 'coveralls', '~> 0.7'
  end
---- ruby-crb-blast.orig/metadata.yml
-+++ ruby-crb-blast/metadata.yml
-@@ -146,26 +146,6 @@
-       - !ruby/object:Gem::Version
-         version: 0.9.7
- - !ruby/object:Gem::Dependency
--  name: simplecov
--  requirement: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '0.8'
--    - - ">="
--      - !ruby/object:Gem::Version
--        version: 0.8.2
--  type: :development
--  prerelease: false
--  version_requirements: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '0.8'
--    - - ">="
--      - !ruby/object:Gem::Version
--        version: 0.8.2
--- !ruby/object:Gem::Dependency
-   name: shoulda-context
-   requirement: !ruby/object:Gem::Requirement
-     requirements:
-@@ -185,20 +165,6 @@
-     - - ">="
-       - !ruby/object:Gem::Version
-         version: 1.2.1
--- !ruby/object:Gem::Dependency
--  name: coveralls
--  requirement: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '0.7'
--  type: :development
--  prerelease: false
--  version_requirements: !ruby/object:Gem::Requirement
--    requirements:
--    - - "~>"
--      - !ruby/object:Gem::Version
--        version: '0.7'
- description: See summary
- email: cmb211 at cam.ac.uk
- executables:

-- 
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