[Cdd-commits] r535 - projects/med/trunk/debian-med/tasks
CDD Subversion Commit
noreply at alioth.debian.org
Sun Feb 3 00:03:11 UTC 2008
Author: tille
Date: Sun Feb 3 00:03:10 2008
New Revision: 535
Modified:
projects/med/trunk/debian-med/tasks/bio
Log:
Fixed spacing
Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Sun Feb 3 00:03:10 2008
@@ -32,7 +32,8 @@
Why: This is only recommended to not necessarily flood the system with TeX
packages - perhaps target for -doc?
-Depends: biosquid, gff2ps, mipe, melting, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, perlprimer, primer3, readseq, tigr-glimmer
+Depends: biosquid, gff2ps, mipe, melting, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11,
+ perlprimer, primer3, readseq, tigr-glimmer
Why: Tools for the molecular biologist.
Suggests: mozilla-biofox
@@ -82,18 +83,18 @@
License: non-free for commercial purpose (http://meme.nbcr.net/meme/COPYRIGHT.html)
WNPP:
Pkg-Description: motif discovery and search
- MEME is a tool for discovering motifs in a group of related DNA or protein
- sequences. A motif is a sequence pattern that occurs repeatedly in a group
- of related protein or DNA sequences. MEME represents motifs as position-dependent
- letter-probability matrices which describe the probability of each possible
- letter at each position in the pattern. Individual MEME motifs do not contain
- gaps. Patterns with variable-length gaps are split by MEME into two or more
- separate motifs.
- .
- MEME takes as input a group of DNA or protein sequences (the training set)
- and outputs as many motifs as requested. MEME uses statistical modeling
- techniques to automatically choose the best width, number of occurrences,
- and description for each motif.
+ MEME is a tool for discovering motifs in a group of related DNA or protein
+ sequences. A motif is a sequence pattern that occurs repeatedly in a group
+ of related protein or DNA sequences. MEME represents motifs as position-dependent
+ letter-probability matrices which describe the probability of each possible
+ letter at each position in the pattern. Individual MEME motifs do not contain
+ gaps. Patterns with variable-length gaps are split by MEME into two or more
+ separate motifs.
+ .
+ MEME takes as input a group of DNA or protein sequences (the training set)
+ and outputs as many motifs as requested. MEME uses statistical modeling
+ techniques to automatically choose the best width, number of occurrences,
+ and description for each motif.
Depends: vienna-rna
Homepage: http://www.tbi.univie.ac.at/~ivo/RNA/
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