[Cdd-commits] r1111 - projects/med/trunk/debian-med/tasks

[CDD Subversion Commit]

Author: tille
Date: Wed Oct  1 07:35:32 2008
New Revision: 1111

Modified:
   projects/med/trunk/debian-med/tasks/bio
Log:
Added tetra


Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Wed Oct  1 07:35:32 2008
@@ -2898,3 +2898,23 @@
  .
  This package is included into BioLinux distribution
  http://envgen.nox.ac.uk/biolinux.html
+
+Depends: tetra
+Homepage: http://www.megx.net/tetra/
+License: free
+Responsible: BioLinux - Stewart Houten <shou at ceh.ac.uk>
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
+Pkg-Description: tetranucleotide frequency calculator
+ The TETRA program can be used to calculate how well tetranucleotide
+ usage patterns in DNA sequences correlate. Such correlations can
+ provide valuable hints on the relatedne ss of DNA sequences, and are
+ particularly useful for metagenomic sequences.
+ .
+ Remark for the Linux version: Version 1.0.2 (Mac OSX has version
+ 2.0b30) is deprecated and hence a feature-limited version of
+ TETRA. At the time writing, no decisions have been made about
+ adapting and cross-compiling the Mac OS X code for this platform. A
+ Linux version might happen when REALbasic's Linux IDE is more mature.
+ .
+ This package is included into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html