[Deb-scipy-devel] scipy build logs on alpha
Alexandre
Alexandre.Fayolle@logilab.fr
Mon, 27 Sep 2004 15:16:24 +0200
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On Mon, Sep 27, 2004 at 01:45:12PM +0100, Jos=E9 Fonseca wrote:
> Alexandre,
>=20
> On Tue, Sep 21, 2004 at 03:10:16PM +0200, Alexandre wrote:
> > Hi,=20
> >=20
> > I've been having problems with my alpha station (debian's kernel 2.6=20
> > doesn't like ext3 root filesystems on that arch), but finally managed to
> > boot it, and get the build logs for scipy and f2py.=20
> >=20
> > They are attached to this mail.
>=20
> I've skimmed trhough all of them and everything seems alright, doesn't
> it? There are the usual compiler errors resulting of the compiler
> recognition, and the harmless warnings of upstream C code.
If you say so. I was a bit worried about the integer to pointer casts on
a 64bit architecture.=20
> Running the scipy regression tests would provide some reassurance.
I've just lauched
python -c "import scipy; scipy.test()" > scipy_test.log 2>&1
The resulting file is attached to the mail. Unfortunately, the mix=20
of prints to stdout and stderr makes it difficult to read.=20
However, it looks like a few algorithms in scipy.linalg are widely=20
off. The errors in scipy.special are not too worrying (should not be=20
testing floats for equality in the first place)
I don't know about the test_anderson failure in scipy.stats.
> BTW, every once in a while I check packages.qa.debian.org and=20
> python-scipy nevers shows up. What's the current status?
I have no news from this whatsoever. I expect the packages are still in
the queue. I'll try to investigate this. =20
--=20
Alexandre Fayolle LOGILAB, Paris (France).
http://www.logilab.com http://www.logilab.fr http://www.logilab.org
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!! No test file 'test_Mplot.py' found for <module 'scipy.xplt.Mplot' fro=
m '...-packages/scipy/xplt/Mplot.pyc'>
!! No test file 'test_build_py.py' found for <module 'scipy_distutils.co=
mmand.build_py' from '...distutils/command/build_py.pyc'>
!! No test file 'test_gistC.py' found for <module 'scipy.xplt.gistC' fro=
m '...e-packages/scipy/xplt/gistC.so'>
Found 23 tests for scipy_base.function_base
!! No test file 'test_ltisys.py' found for <module 'scipy.signal.ltisys'=
from '...ckages/scipy/signal/ltisys.pyc'>
!! No test file 'test_info_integrate.py' found for <module 'scipy.integr=
ate.info_integrate' from '...y/integrate/info_integrate.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.xxx.yyy' fro=
m '...ges/scipy/xxx/yyy/__init__.pyc'>
!! No test file 'test_vq.py' found for <module 'scipy.cluster.vq' from '=
=2E..-packages/scipy/cluster/vq.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.xxx' from '.=
=2E.ackages/scipy/xxx/__init__.pyc'>
Found 128 tests for scipy.linalg.fblas
!! No test file 'test_ccompiler.py' found for <module 'scipy_distutils.c=
compiler' from '.../scipy_distutils/ccompiler.pyc'>
!! No test file 'test_info_interpolate.py' found for <module 'scipy.inte=
rpolate.info_interpolate' from '...terpolate/info_interpolate.pyc'>
!! No test file 'test_gist.py' found for <module 'scipy.xplt.gist' from =
'...e-packages/scipy/xplt/gist.pyc'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy.linal=
g.__cvs_version__' from '...ipy/linalg/__cvs_version__.pyc'>
!! No test file 'test_info_cow.py' found for <module 'scipy.cow.info_cow=
' from '...ackages/scipy/cow/info_cow.pyc'>
!! No test file 'test__sparsekit.py' found for <module 'scipy.sparse._sp=
arsekit' from '...ges/scipy/sparse/_sparsekit.so'>
!! No test file 'test_spam.py' found for <module 'scipy.xxx.spam' from '=
=2E..ite-packages/scipy/xxx/spam.so'>
!! No test file 'test_write_style.py' found for <module 'scipy.xplt.writ=
e_style' from '...ges/scipy/xplt/write_style.pyc'>
!! No test file 'test_quadpack.py' found for <module 'scipy.integrate.qu=
adpack' from '...s/scipy/integrate/quadpack.pyc'>
!! No test file 'test_info_gplt.py' found for <module 'scipy.gplt.info_g=
plt' from '...kages/scipy/gplt/info_gplt.pyc'>
!! No test file 'test_tree.py' found for <module 'scipy.ga.tree' from '.=
=2E.ite-packages/scipy/ga/tree.pyc'>
Found 92 tests for scipy.stats.stats
Found 30 tests for scipy.linalg.decomp
Found 4 tests for scipy.io.array_import
!! No test file 'test_config_compiler.py' found for <module 'scipy_distu=
tils.command.config_compiler' from '...ls/command/config_compiler.pyc'>
!! No test file 'test_quadrature.py' found for <module 'scipy.integrate.=
quadrature' from '...scipy/integrate/quadrature.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.cow' from '.=
=2E.ackages/scipy/cow/__init__.pyc'>
Found 20 tests for scipy.fftpack.pseudo_diffs
!! No test file 'test_sigtools.py' found for <module 'scipy.signal.sigto=
ols' from '...kages/scipy/signal/sigtools.so'>
!! No test file 'test_optimize.py' found for <module 'scipy.optimize.opt=
imize' from '...es/scipy/optimize/optimize.pyc'>
!! No test file 'test_colorbar.py' found for <module 'scipy.xplt.colorba=
r' from '...ckages/scipy/xplt/colorbar.pyc'>
!! No test file 'test__dsuperlu.py' found for <module 'scipy.sparse._dsu=
perlu' from '...ages/scipy/sparse/_dsuperlu.so'>
!! No test file 'test_scipy_test_version.py' found for <module 'scipy_te=
st.scipy_test_version' from '...py_test/scipy_test_version.pyc'>
!! No test file 'test_plwf.py' found for <module 'scipy.xplt.plwf' from =
'...e-packages/scipy/xplt/plwf.pyc'>
!! No test file 'test_build_clib.py' found for <module 'scipy_distutils.=
command.build_clib' from '...stutils/command/build_clib.pyc'>
!! No test file 'test_specfun.py' found for <module 'scipy.special.specf=
un' from '...kages/scipy/special/specfun.so'>
!! No test file 'test__compiled_base.py' found for <module 'scipy_base._=
compiled_base' from '...s/scipy_base/_compiled_base.so'>
!! No test file 'test_dumb_shelve.py' found for <module 'scipy.io.dumb_s=
helve' from '...kages/scipy/io/dumb_shelve.pyc'>
!! No test file 'test_common_routines.py' found for <module 'scipy.integ=
rate.common_routines' from '.../integrate/common_routines.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy_distutils.co=
mmand' from '...distutils/command/__init__.pyc'>
!! No test file 'test__fftpack.py' found for <module 'scipy.fftpack._fft=
pack' from '...ages/scipy/fftpack/_fftpack.so'>
Found 5 tests for scipy.interpolate.fitpack
!! No test file 'test_calc_lwork.py' found for <module 'scipy.linalg.cal=
c_lwork' from '...ges/scipy/linalg/calc_lwork.so'>
!! No test file 'test_ode.py' found for <module 'scipy.integrate.ode' fr=
om '...ckages/scipy/integrate/ode.pyc'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy.speci=
al.__cvs_version__' from '...py/special/__cvs_version__.pyc'>
!! No test file 'test__ssuperlu.py' found for <module 'scipy.sparse._ssu=
perlu' from '...ages/scipy/sparse/_ssuperlu.so'>
!! No test file 'test_info_io.py' found for <module 'scipy.io.info_io' f=
rom '...-packages/scipy/io/info_io.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.interpolate'=
from '...scipy/interpolate/__init__.pyc'>
!! No test file 'test__zeros.py' found for <module 'scipy.optimize._zero=
s' from '...kages/scipy/optimize/_zeros.so'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy.fftpa=
ck.__cvs_version__' from '...py/fftpack/__cvs_version__.pyc'>
!! No test file 'test__flinalg.py' found for <module 'scipy.linalg._flin=
alg' from '...kages/scipy/linalg/_flinalg.so'>
Found 2 tests for scipy_base.fastumath
!! No test file 'test___init__.py' found for <module 'scipy' from '...te=
-packages/scipy/__init__.pyc'>
!! No test file 'test_convolve.py' found for <module 'scipy.fftpack.conv=
olve' from '...ages/scipy/fftpack/convolve.so'>
Found 2 tests for scipy.linalg.lapack
!! No test file 'test_ga_list.py' found for <module 'scipy.ga.ga_list' f=
rom '...-packages/scipy/ga/ga_list.pyc'>
!! No test file 'test_special_version.py' found for <module 'scipy.speci=
al.special_version' from '...py/special/special_version.pyc'>
Found 19 tests for scipy.fftpack.basic
!! No test file 'test_anneal.py' found for <module 'scipy.optimize.annea=
l' from '...ages/scipy/optimize/anneal.pyc'>
!! No test file 'test_fitpack2.py' found for <module 'scipy.interpolate.=
fitpack2' from '...scipy/interpolate/fitpack2.pyc'>
!! No test file 'test_gene.py' found for <module 'scipy.ga.gene' from '.=
=2E.ite-packages/scipy/ga/gene.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.signal' from=
'...ages/scipy/signal/__init__.pyc'>
!! No test file 'test_info_plt.py' found for <module 'scipy.plt.info_plt=
' from '...ackages/scipy/plt/info_plt.pyc'>
!! No test file 'test_numpyio.py' found for <module 'scipy.io.numpyio' f=
rom '...e-packages/scipy/io/numpyio.so'>
!! No test file 'test_extension.py' found for <module 'scipy_distutils.e=
xtension' from '.../scipy_distutils/extension.pyc'>
!! No test file 'test_data_store.py' found for <module 'scipy.io.data_st=
ore' from '...ckages/scipy/io/data_store.pyc'>
!! No test file 'test_slice3.py' found for <module 'scipy.xplt.slice3' f=
rom '...packages/scipy/xplt/slice3.pyc'>
!! No test file 'test_scipy_base_version.py' found for <module 'scipy_ba=
se.scipy_base_version' from '...py_base/scipy_base_version.pyc'>
!! No test file 'test_algorithm.py' found for <module 'scipy.ga.algorith=
m' from '...ackages/scipy/ga/algorithm.pyc'>
Found 1 tests for scipy.optimize.zeros
!! No test file 'test_info_sparse.py' found for <module 'scipy.sparse.in=
fo_sparse' from '...s/scipy/sparse/info_sparse.pyc'>
!! No test file 'test_info_xplt.py' found for <module 'scipy.xplt.info_x=
plt' from '...kages/scipy/xplt/info_xplt.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.stats' from =
'...kages/scipy/stats/__init__.pyc'>
!! No test file 'test_install.py' found for <module 'scipy_distutils.com=
mand.install' from '..._distutils/command/install.pyc'>
!! No test file 'test_cblas.py' found for <module 'scipy.linalg.cblas' f=
rom '...packages/scipy/linalg/cblas.so'>
!! No test file 'test_pyPlot.py' found for <module 'scipy.gplt.pyPlot' f=
rom '...packages/scipy/gplt/pyPlot.pyc'>
!! No test file 'test_info_cluster.py' found for <module 'scipy.cluster.=
info_cluster' from '...scipy/cluster/info_cluster.pyc'>
!! No test file 'test_mio.py' found for <module 'scipy.io.mio' from '...=
site-packages/scipy/io/mio.pyc'>
!! No test file 'test_install_data.py' found for <module 'scipy_distutil=
s.command.install_data' from '...utils/command/install_data.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.cluster' fro=
m '...ges/scipy/cluster/__init__.pyc'>
Found 4 tests for scipy_base.index_tricks
!! No test file 'test_selection.py' found for <module 'scipy.ga.selectio=
n' from '...ackages/scipy/ga/selection.pyc'>
!! No test file 'test_fftpack_version.py' found for <module 'scipy.fftpa=
ck.fftpack_version' from '...py/fftpack/fftpack_version.pyc'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy_base.=
__cvs_version__' from '...scipy_base/__cvs_version__.pyc'>
!! No test file 'test_movie.py' found for <module 'scipy.xplt.movie' fro=
m '...-packages/scipy/xplt/movie.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.xplt' from '=
=2E..ckages/scipy/xplt/__init__.pyc'>
!! No test file 'test_scaling.py' found for <module 'scipy.ga.scaling' f=
rom '...-packages/scipy/ga/scaling.pyc'>
!! No test file 'test_core.py' found for <module 'scipy_distutils.core' =
=66rom '...kages/scipy_distutils/core.pyc'>
Found 41 tests for scipy.linalg.basic
!! No test file 'test_odepack.py' found for <module 'scipy.integrate.ode=
pack' from '...es/scipy/integrate/odepack.pyc'>
!! No test file 'test_exec_command.py' found for <module 'scipy_distutil=
s.exec_command' from '...ipy_distutils/exec_command.pyc'>
!! No test file 'test_common_routines.py' found for <module 'scipy.optim=
ize.common_routines' from '...y/optimize/common_routines.pyc'>
!! No test file 'test_interpolate.py' found for <module 'scipy.interpola=
te.interpolate' from '...py/interpolate/interpolate.pyc'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy_distu=
tils.__cvs_version__' from '..._distutils/__cvs_version__.pyc'>
!! No test file 'test_wxplt.py' found for <module 'scipy.plt.wxplt' from=
'...e-packages/scipy/plt/wxplt.pyc'>
!! No test file 'test_shapetest.py' found for <module 'scipy.xplt.shapet=
est' from '...kages/scipy/xplt/shapetest.pyc'>
!! No test file 'test_lbfgsb.py' found for <module 'scipy.optimize.lbfgs=
b' from '...ages/scipy/optimize/lbfgsb.pyc'>
!! No test file 'test_language.py' found for <module 'scipy.ga.language'=
from '...packages/scipy/ga/language.pyc'>
!! No test file 'test_info_xxx.py' found for <module 'scipy.xxx.info_xxx=
' from '...ackages/scipy/xxx/info_xxx.pyc'>
Found 43 tests for scipy_base.shape_base
!! No test file 'test_linalg_version.py' found for <module 'scipy.linalg=
=2Elinalg_version' from '...cipy/linalg/linalg_version.pyc'>
!! No test file 'test_interface.py' found for <module 'scipy.plt.interfa=
ce' from '...ckages/scipy/plt/interface.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.plt' from '.=
=2E.ackages/scipy/plt/__init__.pyc'>
Found 9 tests for scipy_base.matrix_base
!! No test file 'test__quadpack.py' found for <module 'scipy.integrate._=
quadpack' from '...s/scipy/integrate/_quadpack.so'>
!! No test file 'test_machar.py' found for <module 'scipy_base.machar' f=
rom '...packages/scipy_base/machar.pyc'>
!! No test file 'test_log.py' found for <module 'scipy_distutils.log' fr=
om '...ckages/scipy_distutils/log.pyc'>
!! No test file 'test_info_scipy_base.py' found for <module 'scipy_base.=
info_scipy_base' from '...scipy_base/info_scipy_base.pyc'>
Found 342 tests for scipy.special.basic
!! No test file 'test_bsplines.py' found for <module 'scipy.signal.bspli=
nes' from '...ages/scipy/signal/bsplines.pyc'>
!! No test file 'test_unixccompiler.py' found for <module 'scipy_distuti=
ls.unixccompiler' from '...py_distutils/unixccompiler.pyc'>
!! No test file 'test__minpack.py' found for <module 'scipy.optimize._mi=
npack' from '...ges/scipy/optimize/_minpack.so'>
!! No test file 'test_clapack.py' found for <module 'scipy.linalg.clapac=
k' from '...ckages/scipy/linalg/clapack.so'>
!! No test file 'test_interface.py' found for <module 'scipy.gplt.interf=
ace' from '...kages/scipy/gplt/interface.pyc'>
!! No test file 'test_scimath.py' found for <module 'scipy_base.scimath'=
from '...ackages/scipy_base/scimath.pyc'>
!! No test file 'test_new_plot.py' found for <module 'scipy.gplt.new_plo=
t' from '...ckages/scipy/gplt/new_plot.pyc'>
!! No test file 'test_futil.py' found for <module 'scipy.stats.futil' fr=
om '...-packages/scipy/stats/futil.so'>
Found 5 tests for scipy.linalg.matfuncs
!! No test file 'test___init__.py' found for <module 'scipy_distutils' f=
rom '...s/scipy_distutils/__init__.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy_test' from '=
=2E..ckages/scipy_test/__init__.pyc'>
!! No test file 'test_vode.py' found for <module 'scipy.integrate.vode' =
=66rom '...ckages/scipy/integrate/vode.so'>
!! No test file 'test___init__.py' found for <module 'scipy.fftpack' fro=
m '...ges/scipy/fftpack/__init__.pyc'>
!! No test file 'test_scipy_distutils_version.py' found for <module 'sci=
py_distutils.scipy_distutils_version' from '...ls/scipy_distutils_version.p=
yc'>
!! No test file 'test___init__.py' found for <module 'scipy.gplt' from '=
=2E..ckages/scipy/gplt/__init__.pyc'>
!! No test file 'test_info_signal.py' found for <module 'scipy.signal.in=
fo_signal' from '...s/scipy/signal/info_signal.pyc'>
!! No test file 'test_sync_cluster.py' found for <module 'scipy.cow.sync=
_cluster' from '...ges/scipy/cow/sync_cluster.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy_base' from '=
=2E..ckages/scipy_base/__init__.pyc'>
!! No test file 'test_yorick.py' found for <module 'scipy.xplt.yorick' f=
rom '...packages/scipy/xplt/yorick.pyc'>
!! No test file 'test_testing.py' found for <module 'scipy_test.testing'=
from '...ackages/scipy_test/testing.pyc'>
!! No test file 'test_scipy_version.py' found for <module 'scipy.scipy_v=
ersion' from '...ckages/scipy/scipy_version.pyc'>
!! No test file 'test_info_fftpack.py' found for <module 'scipy.fftpack.=
info_fftpack' from '...scipy/fftpack/info_fftpack.pyc'>
!! No test file 'test_info_linalg.py' found for <module 'scipy.linalg.in=
fo_linalg' from '...s/scipy/linalg/info_linalg.pyc'>
!! No test file 'test_build_src.py' found for <module 'scipy_distutils.c=
ommand.build_src' from '...istutils/command/build_src.pyc'>
!! No test file 'test__odepack.py' found for <module 'scipy.integrate._o=
depack' from '...es/scipy/integrate/_odepack.so'>
!! No test file 'test_build.py' found for <module 'scipy_distutils.comma=
nd.build' from '...py_distutils/command/build.pyc'>
!! No test file 'test_plot_objects.py' found for <module 'scipy.plt.plot=
_objects' from '...ges/scipy/plt/plot_objects.pyc'>
!! No test file 'test_flapack.py' found for <module 'scipy.linalg.flapac=
k' from '...ckages/scipy/linalg/flapack.so'>
!! No test file 'test_pexec.py' found for <module 'scipy_base.pexec' fro=
m '...-packages/scipy_base/pexec.pyc'>
!! No test file 'test_tnc.py' found for <module 'scipy.optimize.tnc' fro=
m '...ackages/scipy/optimize/tnc.pyc'>
!! No test file 'test_population.py' found for <module 'scipy.ga.populat=
ion' from '...ckages/scipy/ga/population.pyc'>
!! No test file 'test_cephes.py' found for <module 'scipy.special.cephes=
' from '...ckages/scipy/special/cephes.so'>
!! No test file 'test_helpmod.py' found for <module 'scipy.helpmod' from=
'...ite-packages/scipy/helpmod.pyc'>
!! No test file 'test__support.py' found for <module 'scipy.stats._suppo=
rt' from '...kages/scipy/stats/_support.pyc'>
Found 39 tests for scipy_base.type_check
Found 2 tests for scipy_base.limits
!! No test file 'test_filter_design.py' found for <module 'scipy.signal.=
filter_design' from '...scipy/signal/filt..........................caxpy:n=
=3D4
=2E.caxpy:n=3D3
=2E...ccopy:n=3D4
=2E.ccopy:n=3D3
=2E............cscal:n=3D4
=2E...cswap:n=3D4
=2E.cswap:n=3D3
=2E....daxpy:n=3D4
=2E.daxpy:n=3D3
=2E...dcopy:n=3D4
=2E.dcopy:n=3D3
=2E............dscal:n=3D4
=2E...dswap:n=3D4
=2E.dswap:n=3D3
=2E....saxpy:n=3D4
=2E.saxpy:n=3D3
=2E...scopy:n=3D4
=2E.scopy:n=3D3
=2E............sscal:n=3D4
=2E...sswap:n=3D4
=2E.sswap:n=3D3
=2E....zaxpy:n=3D4
=2E.zaxpy:n=3D3
=2E...zcopy:n=3D4
=2E.zcopy:n=3D3
=2E............zscal:n=3D4
=2E...zswap:n=3D4
=2E.zswap:n=3D3
=2E........................................................................=
=2E......................F...........................Warning: 1000000 bytes=
requested, 20 bytes read.
=2E......................./usr/lib/python2.3/site-packages/scipy/interpolat=
e/fitpack2.py:412: UserWarning:=20
The coefficients of the spline returned have been computed as the
minimal norm least-squares solution of a (numerically) rank deficient
system (deficiency=3D7). If deficiency is large, the results may be
inaccurate. Deficiency may strongly depend on the value of eps.
warnings.warn(message)
=2E..................................F....F......FE...........F.F..........=
=2E........................................................................=
=2EF..........................................F............................=
=2E........................................................................=
=2E............................................F...........................=
=2E........................................................................=
=2E........................................................................=
=2E...F....................................................................=
=2E.........................................
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
ERROR: check_simple_overdet (scipy.linalg.basic.test_basic.test_lstsq)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 361, in check_simple_overdet
x,res,r,s =3D lstsq(a,b)
File "/usr/lib/python2.3/site-packages/scipy/linalg/basic.py", line 352, =
in lstsq
if rank=3D=3Dn: resids =3D sum(x[n:]**2)
ArithmeticError: Integer overflow in power.
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple (scipy.linalg.decomp.test_decomp.test_cholesky)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_decomp.py"=
, line 242, in check_simple
assert_array_almost_equal(Numeric.dot(Numeric.transpose(c),c),a)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 679, =
in assert_array_almost_equal
assert cond,\
AssertionError:=20
Arrays are not almost equal (mismatch 100.0%):
Array 1: [[-1885965976648932823 5601654751623046748 -761725725645001531]
[ 5601654751623046748 -5339454195305043312 358622652...
Array 2: [[8 2 3]
[2 9 3]
[3 3 6]]
=09
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple (scipy.linalg.basic.test_basic.test_det)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 273, in check_simple
assert_almost_equal(a_det,-2.0)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 604, =
in assert_almost_equal
assert round(abs(desired - actual),decimal) =3D=3D 0, msg
AssertionError:=20
Items are not equal:
DESIRED: -2.0
ACTUAL: inf
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple (scipy.linalg.basic.test_basic.test_inv)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 202, in check_simple
[[1,0],[0,1]])
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 679, =
in assert_array_almost_equal
assert cond,\
AssertionError:=20
Arrays are not almost equal (mismatch 100.0%):
Array 1: [[9216616637413720064 -4503599627370496]
[9207609438158979072 -9007199254740992]]
Array 2: [[1 0]
[0 1]]
=09
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple_exact (scipy.linalg.basic.test_basic.test_lstsq)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 356, in check_simple_exact
assert_array_almost_equal(Numeric.matrixmultiply(a,x),b)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 679, =
in assert_array_almost_equal
assert cond,\
AssertionError:=20
Arrays are not almost equal (mismatch 50.0%):
Array 1: [0 0]
Array 2: [1 0]
=09
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple (scipy.linalg.basic.test_basic.test_solve)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 74, in check_simple
assert_array_almost_equal(Numeric.matrixmultiply(a,x),b)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 679, =
in assert_array_almost_equal
assert cond,\
AssertionError:=20
Arrays are not almost equal (mismatch 100.0%):
Array 1: [[ nan nan]
[ nan nan]]
Array 2: [[1 0]
[0 1]]
=09
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_simple_sym (scipy.linalg.basic.test_basic.test_solve)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/linalg/tests/test_basic.py",=
line 81, in check_simple_sym
assert_array_almost_equal(Numeric.matrixmultiply(a,x),b)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 679, =
in assert_array_almost_equal
assert cond,\
AssertionError:=20
Arrays are not almost equal (mismatch 100.0%):
Array 1: [[ nan nan]
[ nan nan]]
Array 2: [[1 0]
[0 1]]
=09
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_cbrt (scipy.special.basic.test_basic.test_cbrt)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py"=
, line 749, in check_cbrt
assert_equal(cb,cbrl)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 587, =
in assert_equal
assert desired =3D=3D actual, msg
AssertionError:=20
Items are not equal:
DESIRED: 3.0
ACTUAL: 3.0000000000000004
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_exp10 (scipy.special.basic.test_basic.test_cephes)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py"=
, line 145, in check_exp10
assert_equal(cephes.exp10(2),100.0)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 587, =
in assert_equal
assert desired =3D=3D actual, msg
AssertionError:=20
Items are not equal:
DESIRED: 100.0
ACTUAL: 100.00000000000004
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_exp10 (scipy.special.basic.test_basic.test_exp10)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py"=
, line 913, in check_exp10
assert_equal(ex,exrl)
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 587, =
in assert_equal
assert desired =3D=3D actual, msg
AssertionError:=20
Items are not equal:
DESIRED: 100
ACTUAL: 100.00000000000004
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
FAIL: check_normal (scipy.stats.morestats.test_morestats.test_anderson)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.3/site-packages/scipy/stats/tests/test_morestats.p=
y", line 49, in check_normal
assert_array_less(A, crit[-2:])
File "/usr/lib/python2.3/site-packages/scipy_test/testing.py", line 703, =
in assert_array_less
assert cond,\
AssertionError:=20
Arrays are not less-ordered (mismatch 50.0%):
Array 1: 0.898571033115
Array 2: [ 0.858 1.0209999999999999]
=09
----------------------------------------------------------------------
Ran 923 tests in 13.407s
FAILED (failures=3D10, errors=3D1)
er_design.pyc'>
Found 10 tests for scipy.stats.morestats
!! No test file 'test_ga_util.py' found for <module 'scipy.ga.ga_util' f=
rom '...-packages/scipy/ga/ga_util.pyc'>
!! No test file 'test_genome.py' found for <module 'scipy.ga.genome' fro=
m '...e-packages/scipy/ga/genome.pyc'>
!! No test file 'test_waveforms.py' found for <module 'scipy.signal.wave=
forms' from '...ges/scipy/signal/waveforms.pyc'>
!! No test file 'test_Sparse.py' found for <module 'scipy.sparse.Sparse'=
from '...ckages/scipy/sparse/Sparse.pyc'>
!! No test file 'test_common_routines.py' found for <module 'scipy.inter=
polate.common_routines' from '...nterpolate/common_routines.pyc'>
!! No test file 'test_dist.py' found for <module 'scipy_distutils.dist' =
=66rom '...kages/scipy_distutils/dist.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.io' from '..=
=2Epackages/scipy/io/__init__.pyc'>
!! No test file 'test_pl3d.py' found for <module 'scipy.xplt.pl3d' from =
'...e-packages/scipy/xplt/pl3d.pyc'>
!! No test file 'test_info_special.py' found for <module 'scipy.special.=
info_special' from '...scipy/special/info_special.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.integrate' f=
rom '...s/scipy/integrate/__init__.pyc'>
!! No test file 'test_flinalg.py' found for <module 'scipy.linalg.flinal=
g' from '...kages/scipy/linalg/flinalg.pyc'>
Found 13 tests for scipy.linalg.blas
!! No test file 'test___cvs_version__.py' found for <module 'scipy_test.=
__cvs_version__' from '...scipy_test/__cvs_version__.pyc'>
!! No test file 'test_rv.py' found for <module 'scipy.stats.rv' from '..=
=2Ete-packages/scipy/stats/rv.pyc'>
!! No test file 'test_tree_opt.py' found for <module 'scipy.ga.tree_opt'=
from '...packages/scipy/ga/tree_opt.pyc'>
!! No test file 'test_minpack.py' found for <module 'scipy.optimize.minp=
ack' from '...ges/scipy/optimize/minpack.pyc'>
!! No test file 'test_spline.py' found for <module 'scipy.signal.spline'=
from '...ackages/scipy/signal/spline.so'>
!! No test file 'test___init__.py' found for <module 'scipy.ga' from '..=
=2Epackages/scipy/ga/__init__.pyc'>
Found 2 tests for scipy.xxx.foo
!! No test file 'test_pilutil.py' found for <module 'scipy.pilutil' from=
'...ite-packages/scipy/pilutil.pyc'>
!! No test file 'test__fitpack.py' found for <module 'scipy.interpolate.=
_fitpack' from '.../scipy/interpolate/_fitpack.so'>
!! No test file 'test__zsuperlu.py' found for <module 'scipy.sparse._zsu=
perlu' from '...ages/scipy/sparse/_zsuperlu.so'>
!! No test file 'test__csuperlu.py' found for <module 'scipy.sparse._csu=
perlu' from '...ages/scipy/sparse/_csuperlu.so'>
!! No test file 'test_orthogonal.py' found for <module 'scipy.special.or=
thogonal' from '...s/scipy/special/orthogonal.pyc'>
!! No test file 'test_dfitpack.py' found for <module 'scipy.interpolate.=
dfitpack' from '.../scipy/interpolate/dfitpack.so'>
!! No test file 'test__superlu.py' found for <module 'scipy.sparse._supe=
rlu' from '...ages/scipy/sparse/_superlu.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.linalg' from=
'...ages/scipy/linalg/__init__.pyc'>
Found 70 tests for scipy.stats.distributions
!! No test file 'test_rand.py' found for <module 'scipy.stats.rand' from=
'...e-packages/scipy/stats/rand.so'>
!! No test file 'test___cvs_version__.py' found for <module 'scipy.__cvs=
_version__' from '...ages/scipy/__cvs_version__.pyc'>
!! No test file 'test_info_stats.py' found for <module 'scipy.stats.info=
_stats' from '...ges/scipy/stats/info_stats.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.optimize' fr=
om '...es/scipy/optimize/__init__.pyc'>
!! No test file 'test_sdist.py' found for <module 'scipy_distutils.comma=
nd.sdist' from '...py_distutils/command/sdist.pyc'>
!! No test file 'test_statlib.py' found for <module 'scipy.stats.statlib=
' from '...ackages/scipy/stats/statlib.so'>
!! No test file 'test___init__.py' found for <module 'scipy.sparse' from=
'...ages/scipy/sparse/__init__.pyc'>
!! No test file 'test_plot_utility.py' found for <module 'scipy.plt.plot=
_utility' from '...ges/scipy/plt/plot_utility.pyc'>
!! No test file 'test_colormap.py' found for <module 'scipy.plt.colormap=
' from '...ackages/scipy/plt/colormap.pyc'>
Found 4 tests for scipy.fftpack.helper
!! No test file 'test_info_optimize.py' found for <module 'scipy.optimiz=
e.info_optimize' from '...ipy/optimize/info_optimize.pyc'>
!! No test file 'test_pickler.py' found for <module 'scipy.io.pickler' f=
rom '...-packages/scipy/io/pickler.pyc'>
!! No test file 'test_line_endings.py' found for <module 'scipy_distutil=
s.line_endings' from '...ipy_distutils/line_endings.pyc'>
!! No test file 'test_install_headers.py' found for <module 'scipy_distu=
tils.command.install_headers' from '...ls/command/install_headers.pyc'>
!! No test file 'test_polynomial.py' found for <module 'scipy_base.polyn=
omial' from '...ages/scipy_base/polynomial.pyc'>
!! No test file 'test___init__.py' found for <module 'scipy.special' fro=
m '...ges/scipy/special/__init__.pyc'>
!! No test file 'test_ppimport.py' found for <module 'scipy_base.ppimpor=
t' from '...ckages/scipy_base/ppimport.pyc'>
!! No test file 'test_misc_util.py' found for <module 'scipy_distutils.m=
isc_util' from '.../scipy_distutils/misc_util.pyc'>
!! No test file 'test_cow.py' found for <module 'scipy.cow.cow' from '..=
=2Eite-packages/scipy/cow/cow.pyc'>
!! No test file 'test_build_ext.py' found for <module 'scipy_distutils.c=
ommand.build_ext' from '...istutils/command/build_ext.pyc'>
Found 3 tests for scipy.signal.signaltools
Found 0 tests for __main__
Don't worry about a warning regarding the number of bytes read.
TESTING CONVERGENCE
zero should be 1
function f2
cc.bisect : 1.0000000000001952
cc.ridder : 1.0000000000004661
cc.brenth : 0.9999999999999997
cc.brentq : 0.9999999999999577
function f3
cc.bisect : 1.0000000000001952
cc.ridder : 1.0000000000000000
cc.brenth : 1.0000000000000009
cc.brentq : 1.0000000000000011
function f4
cc.bisect : 1.0000000000001952
cc.ridder : 1.0000000000001454
cc.brenth : 0.9999999999993339
cc.brentq : 0.9999999999993339
function f5
cc.bisect : 1.0000000000001952
cc.ridder : 1.0000000000004574
cc.brenth : 0.9999999999991444
cc.brentq : 0.9999999999991444
function f6
cc.bisect : 1.0000000000001952
cc.ridder : 1.0000000000002389
cc.brenth : 0.9999999999998370
cc.brentq : 0.9999999999988078
Gegenbauer, a =3D 4.43294934879
shifted jacobi p,q =3D 2.01582017776 2.06877691295
Result may be inaccurate, approximate err =3D 1.81935722365e-08
Result may be inaccurate, approximate err =3D 3.90044584243e-10
Ties preclude use of exact statistic.
Ties preclude use of exact statistic.
Testing alpha
Testing anglit
Testing arcsine
Testing beta
Testing betaprime
Testing bradford
Testing burr
Testing cauchy
Testing chi
Testing chi2
Testing dgamma
Testing dweibull
Testing erlang
Testing expon
Testing exponpow
Testing exponweib
Testing f
Testing fatiguelife
Testing fisk
Testing foldcauchy
Testing foldnorm
Testing frechet_l
Testing frechet_r
Testing gamma
Testing genextreme
Testing gengamma
Testing genhalflogistic
Testing genlogistic
Testing genpareto
Testing gilbrat
Testing gompertz
Testing gumbel_l
Testing gumbel_r
Testing halfcauchy
Testing halflogistic
Testing halfnorm
Testing hypsecant
Testing laplace
Testing loggamma
Testing logistic
Testing lognorm
Testing lomax
Testing maxwell
Testing nakagami
Testing ncf
Testing nct
Testing ncx2
Testing norm
Testing pareto
Testing powerlaw
Testing rayleigh
Testing reciprocal
Testing t
Testing triang
Testing tukeylambda
Testing uniform
Testing weibull_max
Testing weibull_min
--C1iGAkRnbeBonpVg--
--Rgf3q3z9SdmXC6oT
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