r38254 - in /packages/pastix: ./ trunk/ trunk/debian/ trunk/debian/source/
saramito-guest at users.alioth.debian.org
saramito-guest at users.alioth.debian.org
Sun Mar 27 16:08:47 UTC 2011
Author: saramito-guest
Date: Sun Mar 27 16:08:36 2011
New Revision: 38254
URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=38254
Log:
debian files for pastix
Added:
packages/pastix/
packages/pastix/trunk/
packages/pastix/trunk/debian/
packages/pastix/trunk/debian/README.Debian
packages/pastix/trunk/debian/changelog
packages/pastix/trunk/debian/compat
packages/pastix/trunk/debian/config-debian.in
packages/pastix/trunk/debian/control
packages/pastix/trunk/debian/copyright
packages/pastix/trunk/debian/docs
packages/pastix/trunk/debian/libpastix-dev.install
packages/pastix/trunk/debian/libpastix1.install
packages/pastix/trunk/debian/pastix-doc.doc-base.refcard
packages/pastix/trunk/debian/pastix-doc.install
packages/pastix/trunk/debian/pastix.install
packages/pastix/trunk/debian/rules (with props)
packages/pastix/trunk/debian/source/
packages/pastix/trunk/debian/source/format
packages/pastix/trunk/debian/watch
Added: packages/pastix/trunk/debian/README.Debian
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/README.Debian?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/README.Debian (added)
+++ packages/pastix/trunk/debian/README.Debian Sun Mar 27 16:08:36 2011
@@ -1,0 +1,3 @@
+PaStiX for Debian
+-----------------
+
Added: packages/pastix/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/changelog?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/changelog (added)
+++ packages/pastix/trunk/debian/changelog Sun Mar 27 16:08:36 2011
@@ -1,0 +1,6 @@
+pastix (3184-1) unstable; urgency=low
+
+ * initial version
+
+ -- Pierre Saramito <pierre.saramito at imag.fr> Thu, 26 March 2011 08:10:11 +0200
+
Added: packages/pastix/trunk/debian/compat
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/compat?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/compat (added)
+++ packages/pastix/trunk/debian/compat Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+7
Added: packages/pastix/trunk/debian/config-debian.in
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/config-debian.in?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/config-debian.in (added)
+++ packages/pastix/trunk/debian/config-debian.in Sun Mar 27 16:08:36 2011
@@ -1,0 +1,194 @@
+HOSTARCH = i686_pc_linux
+VERSIONBIT = _32bit
+EXEEXT =
+OBJEXT = .o
+LIBEXT = .a
+CCPROG = gcc -Wall
+CFPROG = gfortran
+CF90PROG = gfortran -ffree-form
+MCFPROG = mpif90
+CF90CCPOPT = -ffree-form -x f95-cpp-input
+# Compilation options for optimization (make expor)
+CCFOPT = -O3
+# Compilation options for debug (make | make debug)
+CCFDEB = -g3
+
+LKFOPT =
+MKPROG = make
+MPCCPROG = mpicc -Wall
+CPP = cpp
+ARFLAGS = ruv
+ARPROG = ar
+EXTRALIB = /usr/lib/libgfortran.so.3 -lm -lrt
+
+VERSIONMPI = _mpi
+VERSIONSMP = _smp
+VERSIONSCH = _static
+VERSIONINT = _int
+VERSIONPRC = _simple
+VERSIONFLT = _real
+VERSIONORD = _scotch
+
+###################################################################
+# INTEGER TYPE #
+###################################################################
+# uncomment the following lines for integer type support (Only 1)
+
+#VERSIONINT = _long
+#CCTYPES = -DFORCE_LONG -DLONG
+#---------------------------
+#VERSIONINT = _int32
+#CCTYPES = -DFORCE_INT32 -DINTSIZE32
+#---------------------------
+#VERSIONINT = _int64
+#CCTYPES = -DFORCE_INT64 -DINTSSIZE64
+
+###################################################################
+# FLOAT TYPE #
+###################################################################
+CCTYPESFLT =
+# uncomment the following lines for double precision support
+VERSIONPRC = _double
+CCTYPESFLT := $(CCTYPESFLT) -DFORCE_DOUBLE -DPREC_DOUBLE
+
+# uncomment the following lines for float=complex support
+#VERSIONFLT = _complex
+#CCTYPESFLT := $(CCTYPESFLT) -DFORCE_COMPLEX -DTYPE_COMPLEX
+
+
+###################################################################
+# MPI/THREADS #
+###################################################################
+
+# uncomment the following lines for sequential (NOMPI) version
+VERSIONMPI = _nompi
+CCTYPES := $(CCTYPES) -DFORCE_NOMPI
+MPCCPROG = $(CCPROG)
+MCFPROG = $(CFPROG)
+
+# uncomment the following lines for non-threaded (NOSMP) version
+#VERSIONSMP = _nosmp
+#CCTYPES := $(CCTYPES) -DFORCE_NOSMP
+
+# Uncomment the following line to enable a progression thread
+#CCPASTIX := $(CCPASTIX) -DTHREAD_COMM
+
+# Uncomment the following line if your MPI doesn't support MPI_THREAD_MULTIPLE level
+#CCPASTIX := $(CCPASTIX) -DPASTIX_FUNNELED
+
+# Uncomment the following line if your MPI doesn't support MPI_Datatype correctly
+#CCPASTIX := $(CCPASTIX) -DNO_MPI_TYPE
+
+###################################################################
+# Options #
+###################################################################
+
+# Uncomment the following lines for NUMA-aware allocation (recommended)
+CCPASTIX := $(CCPASTIX) -DNUMA_ALLOC
+
+# Show memory usage statistics
+#CCPASTIX := $(CCPASTIX) -DMEMORY_USAGE
+
+# Show memory usage statistics in solver
+#CCPASTIX := $(CCPASTIX) -DSTATS_SOPALIN
+
+# Uncomment following line for dynamic thread scheduling support
+#CCPASTIX := $(CCPASTIX) -DPASTIX_DYNSCHED
+
+# Uncomment the following lines for Out-of-core
+#CCPASTIX := $(CCPASTIX) -DOOC -DOOC_NOCOEFINIT -DOOC_DETECT_DEADLOCKS
+
+###################################################################
+# GRAPH PARTITIONING #
+###################################################################
+
+# uncomment the following lines for using metis ordering
+#VERSIONORD = _metis
+#METIS_HOME = ${HOME}/metis-4.0
+#CCPASTIX := $(CCPASTIX) -DMETIS -I$(METIS_HOME)/Lib
+#EXTRALIB := $(EXTRALIB) -L$(METIS_HOME) -lmetis
+
+# Scotch always needed to compile
+SCOTCH_HOME ?= ${HOME}/sys
+SCOTCH_INC ?= $(SCOTCH_HOME)/include/scotch
+SCOTCH_LIB ?= $(SCOTCH_HOME)/lib
+# uncomment on of this blocks
+#scotch
+CCPASTIX := $(CCPASTIX) -I$(SCOTCH_INC) -DWITH_SCOTCH
+EXTRALIB := $(EXTRALIB) -L$(SCOTCH_LIB) -lscotch -lscotcherrexit -lz
+#ptscotch
+#CCPASTIX := $(CCPASTIX) -I$(SCOTCH_INC) -DDISTRIBUTED -DWITH_SCOTCH
+#EXTRALIB := $(EXTRALIB) -L$(SCOTCH_LIB) -lptscotch -lscotcherrexit -lz
+
+###################################################################
+# Portable Hardware Locality #
+###################################################################
+# If HwLoc library is available, uncomment the following lines to bind correctly threads on cpus
+#HWLOC_HOME ?= /opt/hwloc/
+#HWLOC_INC ?= $(HWLOC_HOME)/include
+#HWLOC_LIB ?= $(HWLOC_HOME)/lib
+#CCPASTIX := $(CCPASTIX) -I$(HWLOC_INC) -DWITH_HWLOC
+#EXTRALIB := $(EXTRALIB) -L$(HWLOC_LIB) -lhwloc
+
+###################################################################
+# MARCEL #
+###################################################################
+
+# Uncomment following lines for marcel thread support
+#VERSIONSMP := $(VERSIONSMP)_marcel
+#CCPASTIX := $(CCPASTIX) `pm2-config --cflags` -I${PM2_ROOT}/marcel/include/pthread
+#EXTRALIB := $(EXTRALIB) `pm2-config --libs`
+# ---- Thread Posix ------
+EXTRALIB := $(EXTRALIB) -lpthread
+
+# Uncomment following line for bubblesched framework support (need marcel support)
+#VERSIONSCH = _dyn
+#CCPASTIX := $(CCPASTIX) -DPASTIX_BUBBLESCHED
+
+###################################################################
+# BLAS #
+###################################################################
+
+# Choose Blas library (Only 1)
+# Do not forget to set BLAS_HOME if it is not in your environnement
+# BLAS_HOME=/path/to/blas
+#---- Blas ----
+BLASLIB = -lblas
+#---- Gotoblas ----
+#BLASLIB = -L${BLAS_HOME} -lgoto
+#---- MKL ----
+#Uncomment the correct line
+#BLASLIB = -L$(BLAS_HOME) -lmkl_intel_lp64 -lmkl_sequential -lmkl_core
+#BLASLIB = -L$(BLAS_HOME) -lmkl_intel -lmkl_sequential -lmkl_core
+#---- Acml ----
+#BLASLIB = -L$(BLAS_HOME) -lacml
+
+###################################################################
+# PYTHON WRAPPER #
+###################################################################
+#MPI4PY_DIR =
+#MPI4PY_INC = $(MPI4PY_DIR)/src/include/
+#MPI4PY_LIBDIR = $(MPI4PY_DIR)/build/lib.linux-x86_64-2.6/
+#CCTYPES := $(CCTYPES) -fPIC
+
+###################################################################
+# DO NOT TOUCH #
+###################################################################
+
+FOPT := $(CCFOPT)
+FDEB := $(CCFDEB)
+CCHEAD := $(CCPROG) $(CCTYPES) $(CCFOPT)
+CCFOPT := $(CCFOPT) $(CCTYPES) $(CCPASTIX)
+CCFDEB := $(CCFDEB) $(CCTYPES) $(CCPASTIX)
+
+
+###################################################################
+# MURGE COMPATIBILITY #
+###################################################################
+
+MAKE = $(MKPROG)
+CC = $(MPCCPROG)
+CFLAGS = $(CCFOPT) $(CCTYPESFLT)
+FC = $(MCFPROG)
+FFLAGS = $(CCFOPT)
+LDFLAGS = $(EXTRALIB) $(BLASLIB)
Added: packages/pastix/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/control?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/control (added)
+++ packages/pastix/trunk/debian/control Sun Mar 27 16:08:36 2011
@@ -1,0 +1,54 @@
+Source: pastix
+Section: math
+Priority: optional
+Maintainer: Debian Science Maintainers <debian-science-maintainers at lists.alioth.debian.org>
+Uploaders: Pierre Saramito <pierre.saramito at imag.fr>
+Homepage: http://pastix.gforge.inria.fr
+Build-Depends: debhelper (>=7), autoconf, automake, libtool, libltdl-dev | libltdl3-dev, flex, bison, xutils-dev, libboost-dev, libboost-iostreams-dev, libboost-serialization-dev, libginac-dev, ginac-tools, libsuitesparse-dev, libstdc++6, texi2html, texinfo, texlive-latex-recommended, texlive-latex-extra, texlive-math-extra, texlive-font-utils, ghostscript, gnuplot, xfig, transfig, texinfo, imagemagick, doxygen, graphviz
+Standards-Version: 3.9.1
+Vcs-Svn: svn://svn.debian.org/svn/debian-science/packages/pastix/trunk/
+Vcs-Browser: http://svn.debian.org/viewsvn/debian-science/packages/pastix/trunk/
+
+Package: libpastix1
+Section: libs
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Suggests: pastix-doc
+Description: Parallel sparse matrix package (shared library)
+ PaStiX (Parallel Sparse matriX package) is a scientific library that
+ provides a high performance parallel solver for very large sparse
+ linear systems based on direct and block ILU(k) iterative methods.
+
+Package: libpastix-dev
+Section: libdevel
+Architecture: any
+Depends: libpastix1(= ${binary:Version}), pastix, ${misc:Depends}
+Recommends: pastix-doc
+Suggests:
+Description: Parallel sparse matrix package (headers)
+ PaStiX (Parallel Sparse matriX package) is a scientific library that
+ provides a high performance parallel solver for very large sparse
+ linear systems based on direct and block ILU(k) iterative methods.
+
+Package: pastix-doc
+Section: doc
+Architecture: all
+Depends: ${misc:Depends}, dpkg (>= 1.15.4)
+Conflicts: libpastix-doc
+Replaces: libpastix-doc
+Description: Parallel sparse matrix package (documentation)
+ PaStiX (Parallel Sparse matriX package) is a scientific library that
+ provides a high performance parallel solver for very large sparse
+ linear systems based on direct and block ILU(k) iterative methods.
+
+Package: pastix
+Section: math
+Architecture: any
+Depends: ${shlibs:Depends}, libpastix1, ${misc:Depends}
+Recommends: libpastix-dev, pastix-doc
+Description: Parallel sparse matrix package
+ PaStiX (Parallel Sparse matriX package) is a scientific library that
+ provides a high performance parallel solver for very large sparse
+ linear systems based on direct and block ILU(k) iterative methods.
+
+
Added: packages/pastix/trunk/debian/copyright
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/copyright?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/copyright (added)
+++ packages/pastix/trunk/debian/copyright Sun Mar 27 16:08:36 2011
@@ -1,0 +1,18 @@
+Format-Specification: http://svn.debian.org/wsvn/dep/web/deps/dep5.mdwn?op=file&rev=REVISION
+Name: PaStiX
+Maintainer:
+ Faverge Mathieu <faverge at labri.fr>
+ Henon Pascal <henon at labri.fr>
+ Lacoste Xavier <lacoste at labri.fr>
+ Ramet Pierre <ramet at labri.fr>
+
+Source: http://pastix.gforge.inria.fr
+
+Copyright: Copyright 2008 BORDEAUX I UNIVERSITY & INRIA
+
+License: CeCILL-C
+ PaStiX software is governed by the CeCILL-C license under French law
+ and abiding by the rules of distribution of free software. You can
+ use, modify and/or redistribute the software under the terms of the
+ CeCILL-C license as circulated by CEA, CNRS and INRIA at the following
+ URL: "http://www.cecill.info".
Added: packages/pastix/trunk/debian/docs
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/docs?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/docs (added)
+++ packages/pastix/trunk/debian/docs Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+src/README.txt
Added: packages/pastix/trunk/debian/libpastix-dev.install
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/libpastix-dev.install?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/libpastix-dev.install (added)
+++ packages/pastix/trunk/debian/libpastix-dev.install Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+usr/include/pastix/*.{h,inc}
Added: packages/pastix/trunk/debian/libpastix1.install
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/libpastix1.install?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/libpastix1.install (added)
+++ packages/pastix/trunk/debian/libpastix1.install Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+usr/lib/*.a
Added: packages/pastix/trunk/debian/pastix-doc.doc-base.refcard
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/pastix-doc.doc-base.refcard?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/pastix-doc.doc-base.refcard (added)
+++ packages/pastix/trunk/debian/pastix-doc.doc-base.refcard Sun Mar 27 16:08:36 2011
@@ -1,0 +1,7 @@
+Document: pastix-refcard
+Title: PaStiX Library - Reference Card
+Author: Faverge Mathieu, Henon Pascal, Lacoste Xavier, Ramet Pierre
+Abstract: PaStiX (Parallel Sparse matriX package) is a scientific library that provides a high performance parallel solver for very large sparse linear systems based on direct and block ILU(k) iterative methods.
+Section: Science/Mathematics
+Format: PDF
+Files: /usr/share/doc/pastix-doc/pastix-refcard.pdf
Added: packages/pastix/trunk/debian/pastix-doc.install
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/pastix-doc.install?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/pastix-doc.install (added)
+++ packages/pastix/trunk/debian/pastix-doc.install Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+usr/share/doc/*
Added: packages/pastix/trunk/debian/pastix.install
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/pastix.install?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/pastix.install (added)
+++ packages/pastix/trunk/debian/pastix.install Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+usr/bin/*
Added: packages/pastix/trunk/debian/rules
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/rules?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/rules (added)
+++ packages/pastix/trunk/debian/rules Sun Mar 27 16:08:36 2011
@@ -1,0 +1,94 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+# Variables declaration
+VERSION=3184
+ABI_VERSION=1
+LIBPASTIX=libpastix${ABI_VERSION}
+LIBPASTIX_DEV=libpastix-dev
+PASTIX_DOC=pastix-doc
+PASTIX_RUNTIME=pastix
+TMPDIR=debian/tmp-pastix
+
+CFLAGS = -Wall -g
+
+ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
+ CFLAGS += -O0
+else
+ CFLAGS += -O2
+endif
+
+configure: configure-stamp
+configure-stamp:
+ dh_testdir
+ cp debian/config-debian.in src/
+ touch configure-stamp
+
+build: build-stamp
+
+build-stamp: configure-stamp
+ dh_testdir
+ cd src && $(MAKE)
+ touch build-stamp
+
+clean:
+ dh_testdir
+ dh_testroot
+ rm -f build-stamp configure-stamp
+ dh_clean
+ # Removing installation directories
+ rm -Rf $(TMPDIR)
+
+install: build
+ dh_testdir
+ dh_testroot
+ dh_clean
+ dh_installdirs
+ # Add here commands to install the package into DESTDIR
+ mkdirhier $(CURDIR)/$(TMPDIR)/usr/include/pastix
+ cp -av install/*.h $(CURDIR)/$(TMPDIR)/usr/include/pastix
+ cp -av install/*.inc $(CURDIR)/$(TMPDIR)/usr/include/pastix
+ mkdirhier $(CURDIR)/$(TMPDIR)/usr/lib
+ cp -av install/*.a $(CURDIR)/$(TMPDIR)/usr/lib
+ mkdirhier $(CURDIR)/$(TMPDIR)/usr/bin
+ cp -av install/*.sh $(CURDIR)/$(TMPDIR)/usr/bin
+ cp -av install/*-conf $(CURDIR)/$(TMPDIR)/usr/bin
+
+ dh_movefiles --sourcedir=$(TMPDIR)
+
+# Build architecture-independent files here.
+binary-indep: build install
+
+# Build architecture-dependent files here.
+binary-arch: build install
+ dh_testdir
+ dh_testroot
+ dh_install --sourcedir=$(TMPDIR)
+ dh_lintian
+ dh_installinfo
+ dh_installman
+ dh_installexamples
+ dh_makeshlibs
+ dh_shlibdeps --dpkg-shlibdeps-params="--ignore-missing-info"
+ dh_installdocs
+ dh_installchangelogs ChangeLog
+ dh_compress -X.pdf
+ dh_strip
+ dh_link
+ dh_fixperms
+ dh_installdeb
+ dh_gencontrol --dpkg-gencontrol-params="-Tdebian/$(LIBPASTIX).substvars"
+ dh_md5sums
+ dh_builddeb || true
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install configure
+
Propchange: packages/pastix/trunk/debian/rules
------------------------------------------------------------------------------
svn:executable =
Added: packages/pastix/trunk/debian/source/format
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/source/format?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/source/format (added)
+++ packages/pastix/trunk/debian/source/format Sun Mar 27 16:08:36 2011
@@ -1,0 +1,1 @@
+3.0 (quilt)
Added: packages/pastix/trunk/debian/watch
URL: http://svn.debian.org/wsvn/debian-science/packages/pastix/trunk/debian/watch?rev=38254&op=file
==============================================================================
--- packages/pastix/trunk/debian/watch (added)
+++ packages/pastix/trunk/debian/watch Sun Mar 27 16:08:36 2011
@@ -1,0 +1,2 @@
+version=3
+https://gforge.inria.fr/frs/download.php/28290/pastix_release_([0-9]*).tar.bz2
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