[pysph] 01/09: Merge tag 'upstream/0_20150606.gitfa26de9'
Anton Gladky
gladk at moszumanska.debian.org
Sun Jun 7 07:32:20 UTC 2015
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gladk pushed a commit to branch master
in repository pysph.
commit 436834d8fbe9c65b7574d1e5712da5d9bcab6991
Merge: 59a152c ad3599b
Author: Anton Gladky <gladk at debian.org>
Date: Sat Jun 6 22:56:06 2015 +0200
Merge tag 'upstream/0_20150606.gitfa26de9'
Upstream version 0~20150606.gitfa26de9
LICENSE.txt | 30 +
MANIFEST.in | 11 +-
README.md | 139 --
README.rst | 166 ++
TODO.md | 6 -
appveyor-run-env.cmd | 6 +
appveyor.yml | 32 +
docs/Images/pysph_viewer.png | Bin 299403 -> 102167 bytes
docs/source/conf.py | 26 +-
docs/source/design/overview.rst | 98 +-
docs/source/design/working_with_particles.rst | 28 +-
docs/source/index.rst | 34 +-
docs/source/installation.rst | 592 +++++-
docs/source/overview.rst | 117 +-
docs/source/reference/equations.rst | 43 +-
docs/source/reference/index.rst | 13 +-
docs/source/reference/particle_array.rst | 12 +
docs/source/reference/tools.rst | 43 +
docs/source/tutorial/circular_patch.rst | 116 ++
docs/source/using_pysph.rst | 83 +-
examples/SPHERIC/moving_square.py | 61 +-
examples/SPHysics/dambreak_sphysics.py | 2 +-
examples/advection_mixing.py | 4 +-
examples/advection_test.py | 4 +-
examples/dam_break.py | 4 +-
examples/dam_break3D.py | 2 +-
examples/db_geometry.py | 43 +-
examples/elliptical_drop.py | 10 +-
examples/gas_dynamics/noh.py | 2 +-
examples/gas_dynamics/sedov.py | 2 +-
examples/gas_dynamics/shocktube.py | 2 +-
examples/gas_dynamics/shocktube1d.py | 2 +-
examples/hydrostatic_tank.py | 4 +-
examples/iisph/dam_break.py | 22 +-
examples/iisph/elliptical_drop.py | 8 +-
examples/performance/cube.py | 112 ++
examples/rigid_body/README.rst | 19 +
examples/rigid_body/dam_break3D_sph.py | 140 ++
examples/rigid_body/rigid_block_in_tank.py | 195 ++
examples/rigid_body/rigid_collision.py | 98 +
examples/rigid_body/simple_rigid_body.py | 73 +
examples/rigid_body/sph.vtk.gz | Bin 0 -> 161862 bytes
examples/solid_mech/rings.py | 6 +-
examples/solid_mech/taylor_bar.py | 2 +-
examples/summation_density.py | 6 +-
examples/surface_tension/circular_droplet.py | 6 +-
examples/surface_tension/khi_sy11.py | 4 +-
examples/surface_tension/khi_tvf.py | 26 +-
examples/surface_tension/square_droplet.py | 13 +-
examples/transport_velocity/cavity.py | 25 +-
examples/transport_velocity/couette.py | 34 +-
examples/transport_velocity/lattice_cylinders.py | 23 +-
examples/transport_velocity/periodic_cylinders.py | 25 +-
examples/transport_velocity/poiseuille.py | 25 +-
examples/transport_velocity/rayleigh_taylor.py | 39 +-
examples/transport_velocity/taylor_green.py | 8 +-
examples/trivial_inlet_outlet.py | 122 ++
pip_requirements.txt | 6 -
pysph/__init__.py | 4 +
pysph/base/ast_utils.py | 8 +-
pysph/base/c_kernels.pyx | 360 +++-
.../base/{c_kernels_pyx.src => c_kernels.pyx.mako} | 37 +-
pysph/base/carray.pxd | 178 --
pysph/base/carray.pyx | 1842 ------------------
pysph/base/carray_pxd.src | 92 -
pysph/base/carray_pyx.src | 534 ------
pysph/base/config.py | 38 +
pysph/base/cython_generator.py | 59 +-
pysph/base/ext_module.py | 81 +-
pysph/base/generator.py | 149 --
pysph/base/kernels.py | 68 +-
pysph/base/nnps.pxd | 144 +-
pysph/base/nnps.pyx | 1850 ++++++++++--------
pysph/base/particle_array.pxd | 4 +-
pysph/base/particle_array.pyx | 409 ++--
pysph/base/point.pxd | 8 +-
pysph/base/point.pyx | 4 +-
pysph/base/reduce_array.py | 67 +
pysph/base/tests/benchmark_nnps.py | 177 --
pysph/base/tests/particle_array_tests.py | 51 +-
pysph/base/tests/test_carray.py | 116 +-
pysph/base/tests/test_config.py | 59 +
pysph/base/tests/test_cython_generator.py | 99 +-
pysph/base/tests/test_domain_manager.py | 232 +++
pysph/base/tests/test_ext_module.py | 57 +-
pysph/base/tests/test_neighbor_cache.py | 94 +
pysph/base/tests/test_nnps.py | 237 ++-
pysph/base/tests/test_reduce_array.py | 44 +
pysph/base/utils.py | 231 ++-
pysph/parallel/parallel_manager.pyx | 55 +-
pysph/parallel/parallel_utils.py | 2 +-
pysph/parallel/test/test_parallel.py | 27 -
pysph/parallel/test/test_parallel_run.py | 155 --
pysph/parallel/{test => tests}/IPART.txt.gz | Bin
pysph/parallel/tests/__init__.py | 0
.../parallel/tests}/cavity.py | 24 +-
pysph/parallel/tests/check_dump_load.py | 44 +
pysph/parallel/{test => tests}/dambreak3D.py | 7 +-
.../parallel/tests}/elliptical_drop.py | 70 +-
pysph/parallel/tests/example_test_case.py | 152 ++
pysph/parallel/{test => tests}/lb_exchange.py | 0
pysph/parallel/tests/reduce_array.py | 24 +
pysph/parallel/{test => tests}/remote_exchange.py | 0
pysph/parallel/tests/simple_reduction.py | 63 +
.../parallel/{test => tests}/summation_density.py | 22 +-
pysph/parallel/tests/test_openmp.py | 64 +
pysph/parallel/tests/test_parallel.py | 66 +
pysph/parallel/tests/test_parallel_run.py | 49 +
pysph/solver/application.py | 191 +-
pysph/solver/controller.py | 12 +-
pysph/solver/solver.py | 373 ++--
pysph/solver/solver_interfaces.py | 30 +-
pysph/solver/tests/__init__.py | 0
pysph/solver/tests/test_solver_utils.py | 110 ++
pysph/solver/utils.py | 210 ++-
pysph/sph/acceleration_eval.py | 22 +-
pysph/sph/acceleration_eval_cython.mako | 163 +-
pysph/sph/acceleration_eval_cython_helper.py | 128 +-
pysph/sph/basic_equations.py | 150 +-
pysph/sph/boundary_equations.py | 5 +
pysph/sph/equation.py | 119 +-
pysph/sph/iisph.py | 61 +-
pysph/sph/integrator.py | 59 +-
pysph/sph/integrator_cython.mako | 1 +
pysph/sph/integrator_cython_helper.py | 41 +-
pysph/sph/integrator_step.py | 239 ++-
pysph/sph/misc/advection.py | 5 +-
pysph/sph/rigid_body.py | 357 ++++
pysph/sph/simple_inlet_outlet.py | 195 ++
pysph/sph/solid_mech/basic.py | 143 +-
pysph/sph/solid_mech/hvi.py | 5 +-
pysph/sph/sph_compiler.py | 9 +-
pysph/sph/tests/test_acceleration_eval.py | 71 +-
.../tests/test_acceleration_eval_cython_helper.py | 50 +
pysph/sph/tests/test_equations.py | 31 +-
pysph/sph/tests/test_integrator.py | 200 ++
pysph/sph/tests/test_simple_inlet_outlet.py | 219 +++
pysph/sph/wc/basic.py | 285 ++-
pysph/sph/wc/transport_velocity.py | 335 ++--
pysph/tools/gmsh.py | 459 +++++
pysph/tools/interpolator.py | 99 +-
pysph/tools/mayavi_viewer.py | 52 +-
pysph/tools/ndspmhd.py | 3 +-
pysph/tools/pprocess.py | 2 +-
pysph/tools/pysph_to_vtk.py | 37 +-
pysph/tools/run_parallel_script.py | 70 +-
pysph/tools/sphysics.py | 2 +-
pysph/tools/tests/test_interpolator.py | 6 +-
pysph/tools/uniform_distribution.py | 25 +-
pyzoltan/core/carray.pxd | 167 +-
pyzoltan/core/carray.pxd.mako | 92 +
pyzoltan/core/carray.pyx | 1986 ++++++++++++++------
pyzoltan/core/carray.pyx.mako | 750 ++++++++
pyzoltan/core/carray_pxd.src | 92 -
pyzoltan/core/carray_pyx.src | 534 ------
pyzoltan/core/generator.py | 167 +-
pyzoltan/core/msstdint.h | 259 +++
pyzoltan/core/tests/3d_partition.py | 78 +-
pyzoltan/core/tests/geometric_partitioner.py | 20 +-
pyzoltan/core/tests/test_zoltan.py | 26 +-
pyzoltan/core/tests/zcomm.py | 12 +-
pyzoltan/core/zoltan.pyx | 46 +-
requirements-2.6.txt | 8 +
requirements.txt | 5 +
setup.cfg | 4 +
setup.py | 592 ++++--
shippable.yml | 4 +-
windows_env.bat | 3 +
168 files changed, 12730 insertions(+), 7620 deletions(-)
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