[mlpack] 169/207: move implementation details from cpp back to hpp
Barak A. Pearlmutter
barak+git at pearlmutter.net
Thu Mar 23 17:53:51 UTC 2017
This is an automated email from the git hooks/post-receive script.
bap pushed a commit to branch master
in repository mlpack.
commit 820519f293ec6dbebf98af4b27988342bc48babd
Author: stereomatchingkiss <stereomatchingkiss at gmail.com>
Date: Wed Jun 29 05:50:20 2016 +0800
move implementation details from cpp back to hpp
---
src/mlpack/core/data/CMakeLists.txt | 1 -
src/mlpack/core/data/load_csv.hpp | 95 +++++++++++++++++++++++++++++++++++--
2 files changed, 90 insertions(+), 6 deletions(-)
diff --git a/src/mlpack/core/data/CMakeLists.txt b/src/mlpack/core/data/CMakeLists.txt
index 45d3972..be64aac 100644
--- a/src/mlpack/core/data/CMakeLists.txt
+++ b/src/mlpack/core/data/CMakeLists.txt
@@ -6,7 +6,6 @@ set(SOURCES
extension.hpp
format.hpp
load_csv.hpp
- load_csv.cpp
load.hpp
load_impl.hpp
load_arff.hpp
diff --git a/src/mlpack/core/data/load_csv.hpp b/src/mlpack/core/data/load_csv.hpp
index f0a0b38..58f3043 100644
--- a/src/mlpack/core/data/load_csv.hpp
+++ b/src/mlpack/core/data/load_csv.hpp
@@ -15,6 +15,7 @@
#include <set>
#include <string>
+#include "extension.hpp"
#include "format.hpp"
#include "dataset_info.hpp"
@@ -29,7 +30,14 @@ namespace data /** Functions to load and save matrices and models. */ {
class LoadCSV
{
public:
- explicit LoadCSV(std::string file, bool fatal = false);
+ explicit LoadCSV(std::string file, bool fatal = false) :
+ extension(Extension(file)),
+ fatalIfOpenFail(fatal),
+ fileName(std::move(file)),
+ inFile(fileName)
+ {
+ CanOpen();
+ }
template<typename T>
void Load(arma::Mat<T> &inout, DatasetInfo &infoSet, bool transpose = true)
@@ -51,9 +59,56 @@ public:
}
}
- size_t ColSize();
+ size_t ColSize()
+ {
+ //boost tokenizer or strtok can do the same thing, I use
+ //spirit at here because I think this is a nice example
+ using namespace boost::spirit;
+ using bsi_type = boost::spirit::istream_iterator;
+ using iter_type = boost::iterator_range<bsi_type>;
+
+ inFile.clear();
+ inFile.seekg(0, std::ios::beg);
+ //spirit::qi requires iterators to be atleast forward iterators,
+ //but std::istream_iterator is input iteraotr, so we use
+ //boost::spirit::istream_iterator to overcome this problem
+ bsi_type begin(inFile);
+ bsi_type end;
+ size_t col = 0;
+
+ //the parser of boost spirit can work with "actions"(functor)
+ //when the parser find match target, this functor will be executed
+ auto findColSize = [&col](iter_type){ ++col; };
+
+ //qi::char_ bite an character
+ //qi::char_(",\r\n") only bite a "," or "\r" or "\n" character
+ //* means the parser(ex : qi::char_) can bite [0, any size] of characters
+ //~ means negate, so ~qi::char_(",\r\n") means I want to bite anything except of ",\r\n"
+ //parse % "," means you want to parse string like "1,2,3,apple"(noticed it without last comma)
+
+ //qi::raw restrict the automatic conversion of boost::spirit, without it, spirit parser
+ //will try to convert the string to std::string, this may cause memory allocation(if small string
+ //optimization fail).
+ //After we wrap the parser with qi::raw, the attribute(the data accepted by functor) will
+ //become boost::iterator_range, this could save a tons of memory allocations
+ qi::parse(begin, end, qi::raw[*~qi::char_(",\r\n")][findColSize] % ",");
+
+ return col;
+ }
+
+ size_t RowSize()
+ {
+ inFile.clear();
+ inFile.seekg(0, std::ios::beg);
+ size_t row = 0;
+ std::string line;
+ while(std::getline(inFile, line))
+ {
+ ++row;
+ }
- size_t RowSize();
+ return row;
+ }
private:
using iter_type = boost::iterator_range<std::string::iterator>;
@@ -79,7 +134,25 @@ private:
}
};
- bool CanOpen();
+ bool CanOpen()
+ {
+ if(!inFile.is_open())
+ {
+ if(fatalIfOpenFail)
+ {
+ Log::Fatal << "Cannot open file '" << fileName << "'. " << std::endl;
+ }
+ else
+ {
+ Log::Warn << "Cannot open file '" << fileName << "'; load failed."
+ << std::endl;
+ }
+ return false;
+ }
+ inFile.unsetf(std::ios::skipws);
+
+ return true;
+ }
template<typename T>
void NonTranposeParse(arma::Mat<T> &inout, DatasetInfo &infoSet)
@@ -260,7 +333,19 @@ private:
}
boost::spirit::qi::rule<std::string::iterator, iter_type(), boost::spirit::ascii::space_type>
- CreateCharRule() const;
+ CreateCharRule() const
+ {
+ using namespace boost::spirit;
+
+ if(extension == "csv" || extension == "txt")
+ {
+ return qi::raw[*~qi::char_(",\r\n")];
+ }
+ else
+ {
+ return qi::raw[*~qi::char_("\t\r\n")];
+ }
+ }
std::string extension;
bool fatalIfOpenFail;
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/mlpack.git
More information about the debian-science-commits
mailing list