[pkg-bioc] RE: [R-sig-Debian] "Debain" way of installing packages
Gorjanc Gregor
Gregor.Gorjanc@bfro.uni-lj.si
Thu, 28 Apr 2005 06:15:38 +0200
OK, I will try with a script and we can talk later about other things.
--
Lep pozdrav / With regards,
Gregor Gorjanc
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University of Ljubljana
Biotechnical Faculty URI: http://www.bfro.uni-lj.si/MR/ggorjan
Zootechnical Department email: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3 tel: +386 (0)1 72 17 861
SI-1230 Domzale fax: +386 (0)1 72 17 888
Slovenia
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-----Original Message-----
From: Dirk Eddelbuettel [mailto:edd@debian.org]
Sent: =E8et 2005-04-28 04:14
To: Gorjanc Gregor
Cc: pkg-bioc-devel@lists.alioth.debian.org
Subject: RE: [R-sig-Debian] "Debain" way of installing packages
=20
(Removed r-sig-debian, which is more about using R on Debian.)
On 27 April 2005 at 11:51, Gorjanc Gregor wrote:
| > We actually have scripts that "work", they simply need testing, =
extending and
| > polishing. If you register yourself on alioth.d.o, you can check it =
out of
| > the archive and play with it.
| I will try that and play with scripts. However my idea was to provide =
apt-get=20
| within R i.e. through "debian.install.packages" or something like =
that. What
| do you think about that feature? It would be nice to have since we can =
have
Well, you need at least a wrapper like sudo if you want to do it as a =
user.
Also, and as was said in the beginning of the thread, we are dealing =
with two
distinct package managers that do not know about each other. Might be =
best to
keep them seperate.
That said, once we have something working on Debian, there is no reason =
why
you can't pull that "inside" R with some .R code.
| How does Uwe Ligges perform all those binary builds for Windows?
You probably need to ask him. I presume he has a script, just like =
Detlef has
for SuSE (which is based on Albrecht's work, and Albrecht himself then
created a first Debianising script upon which I built and which is the =
basis
of what is on alioth -- but I digress).
So why don't you try your luck with the alioth script once you are =
registered
on alioth and we made you a member of the team. Use this list for =
questions
as e.g. Egon and I could try to help.
Cheers, Dirk
--=20
Better to have an approximate answer to the right question than a =
precise=20
answer to the wrong question. -- John Tukey as quoted by John Chambers