[pkg-bioc] Re: Bioconductor Debian packages

[Faheem Mitha]

On Tue, 26 Jul 2005, Steffen Moeller wrote:

> Hi Guys,
>
> I am pressed with so many things in parallel at the moment, that I have
> not cared enough to update the repository. The auto-build packages of
> bioc are on
>    http://public.pzr.uni-rostock.de/~moeller/mirror/bioc/builds/
> Please check this out, I just did, it seems to work. There is a problem
> with LDAP configuration on that machine which I just circumvented. The
> packages all start with r-bioc, so do not be too surprised if the debs
> appear late on ths list.
>
> Some data packages are also included, otherwise some packages could not
> have been compiled. Please forget about this bioinformatics.pzr address
> for bioconductor packages. These are leftovers from a manual effort in
> packaging of mine.

Excuse my cluelessness, but what is the correct sources.list entry for 
that? I tried

deb http://public.pzr.uni-rostock.de/~moeller/mirror/ ./

but it does not work. For example, I get

After unpacking 4841kB of additional disk space will be used.
Err http://public.pzr.uni-rostock.de ./ r-bioc-affyplm 1.4.0-0.r2d.1
   404 Not Found
Failed to fetch 
http://public.pzr.uni-rostock.de/~moeller/mirror/./bioc/builds/r-bioc-affyplm_1.4.0-0.r2d.1_all.deb 
404 Not Found
E: Unable to fetch some archives, maybe run apt-get update or try with 
--fix-missing?
(sarge1-root)root at io:/home/faheem# wget -c 
http://public.pzr.uni-rostock.de/~moeller/mirror/bioc/builds/r-bioc-affyplm_1.4.0-0.r2d.1_all.deb
--00:25:19-- 
http://public.pzr.uni-rostock.de/~moeller/mirror/bioc/builds/r-bioc-affyplm_1.4.0-0.r2d.1_all.deb
            => `r-bioc-affyplm_1.4.0-0.r2d.1_all.deb'
Resolving public.pzr.uni-rostock.de... 139.30.99.48
Connecting to public.pzr.uni-rostock.de|139.30.99.48|:80... connected.
HTTP request sent, awaiting response... 404 Not Found
00:25:19 ERROR 404: Not Found.

The version installed is actually 1.4.2, so either the Packages.gz needs 
to be updated, or I'm looking in the wrong place. If the former, would you 
be so kind as to update them?

Thanks.                                                         Faheem.